mirror of
https://github.com/ANL-CEEESA/LLEPE.git
synced 2025-12-06 01:48:53 -06:00
Changed iterative fit to only fit to multicomponent data.
This commit is contained in:
42
.idea/workspace.xml
generated
42
.idea/workspace.xml
generated
@@ -2,29 +2,10 @@
|
||||
<project version="4">
|
||||
<component name="ChangeListManager">
|
||||
<list default="true" id="f4439dc0-6756-4612-8f7d-596d8949f300" name="Default Changelist" comment="">
|
||||
<change afterPath="$PROJECT_DIR$/data/csvs/multicomponent_PC88A_HCL_NdPrCeLaDySmY.csv" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/.idea/workspace.xml" beforeDir="false" afterPath="$PROJECT_DIR$/.idea/workspace.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/README.md" beforeDir="false" afterPath="$PROJECT_DIR$/README.md" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/csvs/PC88A_HCL_NdPrCeLaDySmY.csv" beforeDir="false" afterPath="$PROJECT_DIR$/data/csvs/PC88A_HCL_NdPrCeLaDySmY.csv" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/xmls/PC88A_HCL_NdPrCeLaDySmY_w_pitzer.xml" beforeDir="false" afterPath="$PROJECT_DIR$/data/xmls/PC88A_HCL_NdPrCeLaDySmY_w_pitzer.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/xmls/twophase.xml" beforeDir="false" afterPath="$PROJECT_DIR$/data/xmls/twophase.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/Examples/iterative_fitter_eval_grapher.py" beforeDir="false" afterPath="$PROJECT_DIR$/docs/Examples/iterative_fitter_eval_grapher.py" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/Examples/outputs/temp.xml" beforeDir="false" afterPath="$PROJECT_DIR$/docs/Examples/outputs/temp.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/environment.pickle" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/environment.pickle" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/guide/install.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/guide/install.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/guide/quickstart.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/guide/quickstart.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/modules/reeps.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/modules/reeps.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_modules/llepe/llepe.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_modules/llepe/llepe.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_sources/guide/install.rst.txt" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_sources/guide/install.rst.txt" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_sources/guide/quickstart.rst.txt" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_sources/guide/quickstart.rst.txt" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/genindex.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/genindex.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/guide/install.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/guide/install.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/guide/quickstart.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/guide/quickstart.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/modules/reeps.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/modules/reeps.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/objects.inv" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/objects.inv" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/searchindex.js" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/searchindex.js" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/source/guide/install.rst" beforeDir="false" afterPath="$PROJECT_DIR$/docs/source/guide/install.rst" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/source/guide/quickstart.rst" beforeDir="false" afterPath="$PROJECT_DIR$/docs/source/guide/quickstart.rst" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/llepe/llepe.py" beforeDir="false" afterPath="$PROJECT_DIR$/llepe/llepe.py" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/Examples/1_getting_started.ipynb" beforeDir="false" afterPath="$PROJECT_DIR$/docs/Examples/1_getting_started.ipynb" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/examples/iterative_fitter.py" beforeDir="false" afterPath="$PROJECT_DIR$/docs/examples/iterative_fitter.py" afterDir="false" />
|
||||
</list>
|
||||
<option name="SHOW_DIALOG" value="false" />
|
||||
<option name="HIGHLIGHT_CONFLICTS" value="true" />
|
||||
@@ -454,7 +435,14 @@
|
||||
<option name="project" value="LOCAL" />
|
||||
<updated>1595009200358</updated>
|
||||
</task>
|
||||
<option name="localTasksCounter" value="38" />
|
||||
<task id="LOCAL-00038" summary="Updated documentation">
|
||||
<created>1595883443287</created>
|
||||
<option name="number" value="00038" />
|
||||
<option name="presentableId" value="LOCAL-00038" />
|
||||
<option name="project" value="LOCAL" />
|
||||
<updated>1595883443287</updated>
|
||||
</task>
|
||||
<option name="localTasksCounter" value="39" />
|
||||
<servers />
|
||||
</component>
|
||||
<component name="Vcs.Log.Tabs.Properties">
|
||||
@@ -493,7 +481,8 @@
|
||||
<MESSAGE value="Updated iterative_fitter.py to fix slopes to 3, stop after minimal change in best objective. ALso added last results from iteration_fitter.py" />
|
||||
<MESSAGE value="Updated iterative_fitter.py to calculate error for all species. Added new test with mean squared error." />
|
||||
<MESSAGE value="deleted redundant files" />
|
||||
<option name="LAST_COMMIT_MESSAGE" value="deleted redundant files" />
|
||||
<MESSAGE value="Updated documentation" />
|
||||
<option name="LAST_COMMIT_MESSAGE" value="Updated documentation" />
|
||||
</component>
|
||||
<component name="WindowStateProjectService">
|
||||
<state x="-1330" y="212" key="#Inspections" timestamp="1590787654691">
|
||||
@@ -517,9 +506,10 @@
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1213" y="379" key="ANALYSIS_DLG_com.intellij.analysis.BaseAnalysisAction$1/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1590787657711" />
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2" timestamp="1595009194979">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
<state x="-1364" y="115" key="CommitChangelistDialog2" timestamp="1595883440666">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1364" y="115" key="CommitChangelistDialog2/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595883440666" />
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1595009194979" />
|
||||
<state x="662" y="155" key="CommitChangelistDialog2/0.0.1920.1040@0.0.1920.1040" timestamp="1594913509145" />
|
||||
<state x="-1828" y="94" width="1736" height="856" key="DiffContextDialog" timestamp="1591048879404">
|
||||
|
||||
21
data/csvs/multicomponent_PC88A_HCL_NdPrCeLaDySmY.csv
Normal file
21
data/csvs/multicomponent_PC88A_HCL_NdPrCeLaDySmY.csv
Normal file
@@ -0,0 +1,21 @@
|
||||
label,Feed H+[M],Feed H+[M].1,PC88A[M],PC88A[M].1,Feed Nd[M],Xaq Nd,D Nd,Feed Pr[M],Xaq Pr,D Pr,Feed Ce[M],Xaq Ce,D Ce,Feed La[M],Xaq La,D La,Feed Dy[M],Xaq Dy,D Dy,Feed Sm[M],Xaq Sm,D Sm,Feed Y[M],Xaq Y,D Y
|
||||
Lyon (2016),0.02,0.02,1,1,0.048530227,0.029263727,0.658374793,0.04967791,0.035072604,0.416430595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Lyon (2016),0.05,0.05,1,1,0.048530227,0.032127011,0.510574018,0.04967791,0.037506822,0.324503311,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Lyon (2016),0.1,0.1,1,1,0.048530227,0.039018303,0.243781095,0.04967791,0.043070748,0.153402537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Lyon (2016),0.3,0.3,1,1,0.048530227,0.046443428,0.044932079,0.04967791,0.048535318,0.023541453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Banda (2014),1.00E-05,1.00E-05,0.1,0.1,0.022739878,0.017097653,0.33,0.008303308,0.006642646,0.25,0,0,0,0.054425491,0.050393973,0.08,0,0,0,0,0,0,0,0,0
|
||||
Banda (2014),1.00E-05,1.00E-05,0.3,0.3,0.022739878,0.013298174,0.71,0.008303308,0.005462702,0.52,0,0,0,0.054425491,0.048594188,0.12,0,0,0,0,0,0,0,0,0
|
||||
Banda (2014),1.00E-05,1.00E-05,0.5,0.5,0.022739878,0.010932634,1.08,0.008303308,0.004537327,0.83,0,0,0,0.054425491,0.048164151,0.13,0,0,0,0,0,0,0,0,0
|
||||
Banda (2014),1.00E-05,1.00E-05,0.7,0.7,0.022739878,0.009396644,1.42,0.008303308,0.003972875,1.09,0,0,0,0.054425491,0.047326514,0.15,0,0,0,0,0,0,0,0,0
|
||||
Banda (2014),1.00E-05,1.00E-05,0.9,0.9,0.022739878,0.008209342,1.77,0.008303308,0.002997584,1.77,0,0,0,0.054425491,0.045735706,0.19,0,0,0,0,0,0,0,0,0
|
||||
Liu (2014),1.00E-05,1.00E-05,0.1,0.1,0.022739878,0.018928042,0.201385664,0.008303308,0.007354823,0.128960943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Liu (2014),1.00E-05,1.00E-05,0.3,0.3,0.022739878,0.014333115,0.586527247,0.008303308,0.005999476,0.384005473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Liu (2014),1.00E-05,1.00E-05,0.5,0.5,0.022739878,0.010952454,1.076235839,0.008303308,0.004805359,0.727926764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Liu (2014),1.00E-05,1.00E-05,0.7,0.7,0.022739878,0.008786058,1.588177405,0.008303308,0.003974007,1.089404412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Liu (2014),1.00E-05,1.00E-05,0.9,0.9,0.022739878,0.00700602,2.245762712,0.008303308,0.00322327,1.576050934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,0.1,0.1,0.009359401,0.007999488,0.17,0.003371001,0.003064546,0.1,0.038539496,0.037783819,0.02,0.022461314,0.022020896,0.02,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,0.3,0.3,0.009359401,0.006881912,0.36,0.003371001,0.002763116,0.22,0.038539496,0.035357336,0.09,0.022461314,0.021597417,0.04,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,0.5,0.5,0.009359401,0.005813293,0.61,0.003371001,0.002340973,0.44,0.038539496,0.032386131,0.19,0.022461314,0.02060671,0.09,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,0.7,0.7,0.009359401,0.005638193,0.66,0.003371001,0.002147134,0.57,0.038539496,0.03034606,0.27,0.022461314,0.019877269,0.13,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,1,1,0.009359401,0.005005027,0.87,0.003371001,0.001862432,0.81,0.038539496,0.028547775,0.35,0.022461314,0.019702907,0.14,0,0,0,0,0,0,0,0,0
|
||||
Kim (2012),0.01023293,0.01023293,2,2,0.009359401,0.003109436,2.01,0.003371001,0.001404584,1.4,0.038539496,0.021059834,0.83,0.022461314,0.018261231,0.23,0,0,0,0,0,0,0,0,0
|
||||
|
@@ -32,6 +32,20 @@
|
||||
"```pip install -e.```<br/>"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"## Moving neccessary files for example"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"Copy and paste the xml file named 'elementz.xml' from the 'data/xmls' folder to the Cantera data file located in 'Anaconda3/envs/thermo_env/Lib/site-packages/cantera' "
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"metadata": {},
|
||||
|
||||
Reference in New Issue
Block a user