mirror of
https://github.com/ANL-CEEESA/LLEPE.git
synced 2025-12-06 01:48:53 -06:00
Updated documentation
This commit is contained in:
135
.idea/workspace.xml
generated
135
.idea/workspace.xml
generated
@@ -1,9 +1,30 @@
|
||||
<?xml version="1.0" encoding="UTF-8"?>
|
||||
<project version="4">
|
||||
<component name="ChangeListManager">
|
||||
<list default="true" id="f4439dc0-6756-4612-8f7d-596d8949f300" name="Default Changelist" comment="Updated iterative_fitter.py to calculate error for all species. Added new test with mean squared error.">
|
||||
<change afterPath="$PROJECT_DIR$/docs/Examples/outputs/iterative_fitter_output2.csv" afterDir="false" />
|
||||
<change afterPath="$PROJECT_DIR$/docs/Examples/outputs/iterative_fitter_short_info_dict.txt" afterDir="false" />
|
||||
<list default="true" id="f4439dc0-6756-4612-8f7d-596d8949f300" name="Default Changelist" comment="">
|
||||
<change beforePath="$PROJECT_DIR$/.idea/workspace.xml" beforeDir="false" afterPath="$PROJECT_DIR$/.idea/workspace.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/README.md" beforeDir="false" afterPath="$PROJECT_DIR$/README.md" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/csvs/PC88A_HCL_NdPrCeLaDySmY.csv" beforeDir="false" afterPath="$PROJECT_DIR$/data/csvs/PC88A_HCL_NdPrCeLaDySmY.csv" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/xmls/PC88A_HCL_NdPrCeLaDySmY_w_pitzer.xml" beforeDir="false" afterPath="$PROJECT_DIR$/data/xmls/PC88A_HCL_NdPrCeLaDySmY_w_pitzer.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/data/xmls/twophase.xml" beforeDir="false" afterPath="$PROJECT_DIR$/data/xmls/twophase.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/Examples/iterative_fitter_eval_grapher.py" beforeDir="false" afterPath="$PROJECT_DIR$/docs/Examples/iterative_fitter_eval_grapher.py" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/Examples/outputs/temp.xml" beforeDir="false" afterPath="$PROJECT_DIR$/docs/Examples/outputs/temp.xml" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/environment.pickle" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/environment.pickle" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/guide/install.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/guide/install.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/guide/quickstart.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/guide/quickstart.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/doctrees/modules/reeps.doctree" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/doctrees/modules/reeps.doctree" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_modules/llepe/llepe.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_modules/llepe/llepe.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_sources/guide/install.rst.txt" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_sources/guide/install.rst.txt" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/_sources/guide/quickstart.rst.txt" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/_sources/guide/quickstart.rst.txt" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/genindex.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/genindex.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/guide/install.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/guide/install.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/guide/quickstart.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/guide/quickstart.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/modules/reeps.html" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/modules/reeps.html" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/objects.inv" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/objects.inv" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/build/html/searchindex.js" beforeDir="false" afterPath="$PROJECT_DIR$/docs/build/html/searchindex.js" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/source/guide/install.rst" beforeDir="false" afterPath="$PROJECT_DIR$/docs/source/guide/install.rst" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/docs/source/guide/quickstart.rst" beforeDir="false" afterPath="$PROJECT_DIR$/docs/source/guide/quickstart.rst" afterDir="false" />
|
||||
<change beforePath="$PROJECT_DIR$/llepe/llepe.py" beforeDir="false" afterPath="$PROJECT_DIR$/llepe/llepe.py" afterDir="false" />
|
||||
</list>
|
||||
<option name="SHOW_DIALOG" value="false" />
|
||||
<option name="HIGHLIGHT_CONFLICTS" value="true" />
|
||||
@@ -41,7 +62,7 @@
|
||||
<property name="run.code.analysis.last.selected.profile" value="aDefault" />
|
||||
<property name="settings.editor.selected.configurable" value="preferences.sourceCode" />
|
||||
</component>
|
||||
<component name="RunManager" selected="Python.iterative_fitter_w_mse">
|
||||
<component name="RunManager" selected="Python.scratch_1">
|
||||
<configuration name="estimator_eval" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<module name="parameter-estimation" />
|
||||
<option name="INTERPRETER_OPTIONS" value="" />
|
||||
@@ -78,6 +99,27 @@
|
||||
<option name="INPUT_FILE" value="" />
|
||||
<method v="2" />
|
||||
</configuration>
|
||||
<configuration name="grapher_r2" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<module name="parameter-estimation" />
|
||||
<option name="INTERPRETER_OPTIONS" value="" />
|
||||
<option name="PARENT_ENVS" value="true" />
|
||||
<envs>
|
||||
<env name="PYTHONUNBUFFERED" value="1" />
|
||||
</envs>
|
||||
<option name="SDK_HOME" value="" />
|
||||
<option name="WORKING_DIRECTORY" value="$PROJECT_DIR$/../../anl_box/Box Sync/titus/figures/graphers" />
|
||||
<option name="IS_MODULE_SDK" value="false" />
|
||||
<option name="ADD_CONTENT_ROOTS" value="true" />
|
||||
<option name="ADD_SOURCE_ROOTS" value="true" />
|
||||
<option name="SCRIPT_NAME" value="$PROJECT_DIR$/../../anl_box/Box Sync/titus/figures/graphers/grapher_r2.py" />
|
||||
<option name="PARAMETERS" value="" />
|
||||
<option name="SHOW_COMMAND_LINE" value="false" />
|
||||
<option name="EMULATE_TERMINAL" value="false" />
|
||||
<option name="MODULE_MODE" value="false" />
|
||||
<option name="REDIRECT_INPUT" value="false" />
|
||||
<option name="INPUT_FILE" value="" />
|
||||
<method v="2" />
|
||||
</configuration>
|
||||
<configuration name="iterative_fitter_eval_grapher" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<module name="parameter-estimation" />
|
||||
<option name="INTERPRETER_OPTIONS" value="" />
|
||||
@@ -96,25 +138,7 @@
|
||||
<option name="INPUT_FILE" value="" />
|
||||
<method v="2" />
|
||||
</configuration>
|
||||
<configuration name="iterative_fitter_w_mse" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<module name="parameter-estimation" />
|
||||
<option name="INTERPRETER_OPTIONS" value="" />
|
||||
<option name="PARENT_ENVS" value="true" />
|
||||
<option name="SDK_HOME" value="" />
|
||||
<option name="WORKING_DIRECTORY" value="$PROJECT_DIR$/docs/examples" />
|
||||
<option name="IS_MODULE_SDK" value="true" />
|
||||
<option name="ADD_CONTENT_ROOTS" value="true" />
|
||||
<option name="ADD_SOURCE_ROOTS" value="true" />
|
||||
<option name="SCRIPT_NAME" value="$PROJECT_DIR$/docs/examples/iterative_fitter_w_mse.py" />
|
||||
<option name="PARAMETERS" value="" />
|
||||
<option name="SHOW_COMMAND_LINE" value="true" />
|
||||
<option name="EMULATE_TERMINAL" value="false" />
|
||||
<option name="MODULE_MODE" value="false" />
|
||||
<option name="REDIRECT_INPUT" value="false" />
|
||||
<option name="INPUT_FILE" value="" />
|
||||
<method v="2" />
|
||||
</configuration>
|
||||
<configuration name="zeroes_removed_fit" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<configuration name="scratch_1" type="PythonConfigurationType" factoryName="Python" temporary="true" nameIsGenerated="true">
|
||||
<module name="parameter-estimation" />
|
||||
<option name="INTERPRETER_OPTIONS" value="" />
|
||||
<option name="PARENT_ENVS" value="true" />
|
||||
@@ -122,11 +146,11 @@
|
||||
<env name="PYTHONUNBUFFERED" value="1" />
|
||||
</envs>
|
||||
<option name="SDK_HOME" value="" />
|
||||
<option name="WORKING_DIRECTORY" value="$PROJECT_DIR$/../../anl_box/Box Sync/titus/one_rare_earth_fit" />
|
||||
<option name="WORKING_DIRECTORY" value="$APPLICATION_CONFIG_DIR$/scratches" />
|
||||
<option name="IS_MODULE_SDK" value="false" />
|
||||
<option name="ADD_CONTENT_ROOTS" value="true" />
|
||||
<option name="ADD_SOURCE_ROOTS" value="true" />
|
||||
<option name="SCRIPT_NAME" value="$PROJECT_DIR$/../../anl_box/Box Sync/titus/one_rare_earth_fit/zeroes_removed_fit.py" />
|
||||
<option name="SCRIPT_NAME" value="$APPLICATION_CONFIG_DIR$/scratches/scratch_1.py" />
|
||||
<option name="PARAMETERS" value="" />
|
||||
<option name="SHOW_COMMAND_LINE" value="false" />
|
||||
<option name="EMULATE_TERMINAL" value="false" />
|
||||
@@ -137,11 +161,11 @@
|
||||
</configuration>
|
||||
<recent_temporary>
|
||||
<list>
|
||||
<item itemvalue="Python.iterative_fitter_w_mse" />
|
||||
<item itemvalue="Python.scratch_1" />
|
||||
<item itemvalue="Python.iterative_fitter_eval_grapher" />
|
||||
<item itemvalue="Python.eval_mod_lin_params_const_pitzer" />
|
||||
<item itemvalue="Python.estimator_eval" />
|
||||
<item itemvalue="Python.estimator_eval" />
|
||||
<item itemvalue="Python.grapher_r2" />
|
||||
</list>
|
||||
</recent_temporary>
|
||||
</component>
|
||||
@@ -416,7 +440,21 @@
|
||||
<option name="project" value="LOCAL" />
|
||||
<updated>1595008865648</updated>
|
||||
</task>
|
||||
<option name="localTasksCounter" value="36" />
|
||||
<task id="LOCAL-00036" summary="Updated iterative_fitter.py to calculate error for all species. Added new test with mean squared error.">
|
||||
<created>1595009126224</created>
|
||||
<option name="number" value="00036" />
|
||||
<option name="presentableId" value="LOCAL-00036" />
|
||||
<option name="project" value="LOCAL" />
|
||||
<updated>1595009126224</updated>
|
||||
</task>
|
||||
<task id="LOCAL-00037" summary="deleted redundant files">
|
||||
<created>1595009200358</created>
|
||||
<option name="number" value="00037" />
|
||||
<option name="presentableId" value="LOCAL-00037" />
|
||||
<option name="project" value="LOCAL" />
|
||||
<updated>1595009200358</updated>
|
||||
</task>
|
||||
<option name="localTasksCounter" value="38" />
|
||||
<servers />
|
||||
</component>
|
||||
<component name="Vcs.Log.Tabs.Properties">
|
||||
@@ -454,7 +492,8 @@
|
||||
<MESSAGE value="Updated iterative_fitter.py" />
|
||||
<MESSAGE value="Updated iterative_fitter.py to fix slopes to 3, stop after minimal change in best objective. ALso added last results from iteration_fitter.py" />
|
||||
<MESSAGE value="Updated iterative_fitter.py to calculate error for all species. Added new test with mean squared error." />
|
||||
<option name="LAST_COMMIT_MESSAGE" value="Updated iterative_fitter.py to calculate error for all species. Added new test with mean squared error." />
|
||||
<MESSAGE value="deleted redundant files" />
|
||||
<option name="LAST_COMMIT_MESSAGE" value="deleted redundant files" />
|
||||
</component>
|
||||
<component name="WindowStateProjectService">
|
||||
<state x="-1330" y="212" key="#Inspections" timestamp="1590787654691">
|
||||
@@ -478,10 +517,10 @@
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1213" y="379" key="ANALYSIS_DLG_com.intellij.analysis.BaseAnalysisAction$1/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1590787657711" />
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2" timestamp="1595009120606">
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2" timestamp="1595009194979">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1595009120606" />
|
||||
<state x="-1364" y="117" key="CommitChangelistDialog2/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1595009194979" />
|
||||
<state x="662" y="155" key="CommitChangelistDialog2/0.0.1920.1040@0.0.1920.1040" timestamp="1594913509145" />
|
||||
<state x="-1828" y="94" width="1736" height="856" key="DiffContextDialog" timestamp="1591048879404">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
@@ -496,29 +535,37 @@
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1523" y="423" key="GitRewordDialog/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1592321433648" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.bottom" timestamp="1594958896281">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.bottom" timestamp="1595882107104">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.bottom/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595882107104" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.bottom/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1594958896281" />
|
||||
<state width="1897" height="281" key="GridCell.Tab.0.bottom/0.0.1536.824/-1920.2.1920.1040@0.0.1536.824" timestamp="1590795386435" />
|
||||
<state width="1515" height="208" key="GridCell.Tab.0.bottom/0.0.1536.824@0.0.1536.824" timestamp="1595614185238" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.bottom/0.0.1920.1040@0.0.1920.1040" timestamp="1594929812457" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.center" timestamp="1594958896281">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.center" timestamp="1595882107101">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.center/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595882107101" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.center/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1594958896281" />
|
||||
<state width="1897" height="281" key="GridCell.Tab.0.center/0.0.1536.824/-1920.2.1920.1040@0.0.1536.824" timestamp="1590795386434" />
|
||||
<state width="1515" height="208" key="GridCell.Tab.0.center/0.0.1536.824@0.0.1536.824" timestamp="1595614185237" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.center/0.0.1920.1040@0.0.1920.1040" timestamp="1594929812457" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.left" timestamp="1594958896281">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.left" timestamp="1595882107101">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.left/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595882107101" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.left/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1594958896281" />
|
||||
<state width="1897" height="281" key="GridCell.Tab.0.left/0.0.1536.824/-1920.2.1920.1040@0.0.1536.824" timestamp="1590795386433" />
|
||||
<state width="1515" height="208" key="GridCell.Tab.0.left/0.0.1536.824@0.0.1536.824" timestamp="1595614185237" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.left/0.0.1920.1040@0.0.1920.1040" timestamp="1594929812457" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.right" timestamp="1594958896281">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.right" timestamp="1595882107103">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state width="1899" height="278" key="GridCell.Tab.0.right/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595882107103" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.right/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1594958896281" />
|
||||
<state width="1897" height="281" key="GridCell.Tab.0.right/0.0.1536.824/-1920.2.1920.1040@0.0.1536.824" timestamp="1590795386434" />
|
||||
<state width="1515" height="208" key="GridCell.Tab.0.right/0.0.1536.824@0.0.1536.824" timestamp="1595614185238" />
|
||||
<state width="1899" height="279" key="GridCell.Tab.0.right/0.0.1920.1040@0.0.1920.1040" timestamp="1594929812457" />
|
||||
<state width="1899" height="348" key="GridCell.Tab.1.bottom" timestamp="1594852783301">
|
||||
<screen x="-1920" y="2" width="1920" height="1040" />
|
||||
@@ -557,9 +604,10 @@
|
||||
</state>
|
||||
<state x="-1368" y="256" key="Vcs.Push.Dialog.v2/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1592321242949" />
|
||||
<state x="552" y="254" key="Vcs.Push.Dialog.v2/0.0.1920.1040@0.0.1920.1040" timestamp="1594770419652" />
|
||||
<state x="263" y="182" width="1283" height="717" key="com.intellij.ide.util.TipDialog" timestamp="1594821704291">
|
||||
<screen x="0" y="0" width="1920" height="1040" />
|
||||
<state x="-1657" y="182" width="1283" height="717" key="com.intellij.ide.util.TipDialog" timestamp="1595513909435">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1657" y="182" key="com.intellij.ide.util.TipDialog/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595513909435" />
|
||||
<state x="-1341" y="300" key="com.intellij.ide.util.TipDialog/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1593278433547" />
|
||||
<state x="463" y="236" key="com.intellij.ide.util.TipDialog/0.0.1536.824/-1920.2.1920.1040@0.0.1536.824" timestamp="1592413869252" />
|
||||
<state x="263" y="182" width="1283" height="717" key="com.intellij.ide.util.TipDialog/0.0.1920.1040@0.0.1920.1040" timestamp="1594821704291" />
|
||||
@@ -577,9 +625,10 @@
|
||||
</state>
|
||||
<state x="-1219" y="166" key="refactoring.ChangeSignatureDialog/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1591059193684" />
|
||||
<state x="701" y="164" key="refactoring.ChangeSignatureDialog/0.0.1920.1040@0.0.1920.1040" timestamp="1594217920814" />
|
||||
<state x="623" y="225" width="672" height="678" key="search.everywhere.popup" timestamp="1594763968564">
|
||||
<screen x="0" y="0" width="1920" height="1040" />
|
||||
<state x="-1297" y="225" width="672" height="678" key="search.everywhere.popup" timestamp="1595473667161">
|
||||
<screen x="-1920" y="0" width="1920" height="1040" />
|
||||
</state>
|
||||
<state x="-1297" y="225" width="672" height="678" key="search.everywhere.popup/0.0.1536.824/-1920.0.1920.1040@-1920.0.1920.1040" timestamp="1595473667161" />
|
||||
<state x="-1297" y="227" width="672" height="678" key="search.everywhere.popup/0.0.1536.824/-1920.2.1920.1040@-1920.2.1920.1040" timestamp="1594092852973" />
|
||||
<state x="623" y="225" width="672" height="678" key="search.everywhere.popup/0.0.1920.1040@0.0.1920.1040" timestamp="1594763968564" />
|
||||
</component>
|
||||
|
||||
Reference in New Issue
Block a user