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Implement LogisticWarmStartPredicitor with tests
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@@ -2,42 +2,73 @@
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# Copyright (C) 2019-2020 Argonne National Laboratory. All rights reserved.
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# Written by Alinson S. Xavier <axavier@anl.gov>
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from abc import ABC, abstractmethod
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import numpy as np
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from sklearn.pipeline import make_pipeline
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from sklearn.linear_model import LogisticRegression
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from sklearn.preprocessing import StandardScaler
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from sklearn.model_selection import cross_val_score
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class WarmStartPredictor:
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def __init__(self,
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thr_fix_zero=0.05,
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thr_fix_one=0.95,
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thr_predict=0.95):
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self.model = None
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self.thr_predict = thr_predict
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self.thr_fix_zero = thr_fix_zero
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self.thr_fix_one = thr_fix_one
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class WarmStartPredictor(ABC):
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def __init__(self):
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self.models = [None, None]
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def fit(self, x_train, y_train):
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assert isinstance(x_train, np.ndarray)
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assert isinstance(y_train, np.ndarray)
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assert y_train.shape[1] == 2
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assert y_train.shape[0] == x_train.shape[0]
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y_hat = np.average(y_train[:, 1])
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if y_hat < self.thr_fix_zero or y_hat > self.thr_fix_one:
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self.model = int(y_hat)
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else:
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self.model = make_pipeline(StandardScaler(), LogisticRegression())
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self.model.fit(x_train, y_train[:, 1].astype(int))
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assert y_train.shape[1] == 2
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for i in [0,1]:
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self.models[i] = self._fit(x_train, y_train[:, i], i)
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def predict(self, x_test):
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assert isinstance(x_test, np.ndarray)
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if isinstance(self.model, int):
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p_test = np.array([[1 - self.model, self.model]
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for _ in range(x_test.shape[0])])
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else:
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p_test = self.model.predict_proba(x_test)
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p_test[p_test < self.thr_predict] = 0
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p_test[p_test > 0] = 1
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p_test = p_test.astype(int)
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return p_test
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y_pred = np.zeros((x_test.shape[0], 2), dtype=np.int)
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for i in [0,1]:
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if isinstance(self.models[i], int):
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y_pred[:, i] = self.models[i]
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else:
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y_pred[:, i] = self.models[i].predict(x_test)
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return y_pred
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@abstractmethod
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def _fit(self, x_train, y_train, label):
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pass
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class LogisticWarmStartPredictor(WarmStartPredictor):
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def __init__(self,
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min_samples=100,
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thr_fix=[0.99, 0.99],
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thr_balance=[0.95, 0.95],
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thr_score=[0.95, 0.95]):
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super().__init__()
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self.min_samples = min_samples
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self.thr_fix = thr_fix
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self.thr_balance = thr_balance
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self.thr_score = thr_score
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def _fit(self, x_train, y_train, label):
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y_train_avg = np.average(y_train)
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# If number of samples is too small, don't predict anything.
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if x_train.shape[0] < self.min_samples:
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return 0
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# If vast majority of observations are true, always return true.
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if y_train_avg > self.thr_fix[label]:
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return 1
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# If dataset is not balanced enough, don't predict anything.
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if y_train_avg < (1 - self.thr_balance[label]) or y_train_avg > self.thr_balance[label]:
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return 0
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reg = make_pipeline(StandardScaler(), LogisticRegression())
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reg_score = np.mean(cross_val_score(reg, x_train, y_train, cv=5))
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# If cross-validation score is too low, don't predict anything.
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if reg_score < self.thr_score[label]:
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return 0
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reg.fit(x_train, y_train.astype(int))
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return reg
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