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UnitCommitment.jl
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Reformat Python scripts

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bugfix/formulations
Alinson S. Xavier 4 years ago
parent 3687d42733
commit a684419f33
2 changed files with 96 additions and 59 deletions
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37
benchmark/scripts/compare.py
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@ -8,41 +8,49 @@ import seaborn as sns
import matplotlib.pyplot as plt
import sys
#easy_cutoff = 120
# easy_cutoff = 120
b1 = pd.read_csv(sys.argv[1], index_col=0)
b2 = pd.read_csv(sys.argv[2], index_col=0)
c1 = b1.groupby(["Group", "Instance", "Sample"])[["Optimization time (s)", "Primal bound"]].mean()
c2 = b2.groupby(["Group", "Instance", "Sample"])[["Optimization time (s)", "Primal bound"]].mean()
c1 = b1.groupby(["Group", "Instance", "Sample"])[
["Optimization time (s)", "Primal bound"]
].mean()
c2 = b2.groupby(["Group", "Instance", "Sample"])[
["Optimization time (s)", "Primal bound"]
].mean()
c1.columns = ["A Time (s)", "A Value"]
c2.columns = ["B Time (s)", "B Value"]
merged = pd.concat([c1, c2], axis=1)
merged["Speedup"] = merged["A Time (s)"] / merged["B Time (s)"]
merged["Time diff (s)"] = merged["B Time (s)"] - merged["A Time (s)"]
merged["Value diff (%)"] = np.round((merged["B Value"] - merged["A Value"]) / merged["A Value"] * 100.0, 5)
merged["Value diff (%)"] = np.round(
(merged["B Value"] - merged["A Value"]) / merged["A Value"] * 100.0, 5
)
merged.loc[merged.loc[:, "B Time (s)"] <= 0, "Speedup"] = float("nan")
merged.loc[merged.loc[:, "B Time (s)"] <= 0, "Time diff (s)"] = float("nan")
#merged = merged[(merged["A Time (s)"] >= easy_cutoff) | (merged["B Time (s)"] >= easy_cutoff)]
# merged = merged[(merged["A Time (s)"] >= easy_cutoff) | (merged["B Time (s)"] >= easy_cutoff)]
merged.reset_index(inplace=True)
merged["Name"] = merged["Group"] + "/" + merged["Instance"]
#merged = merged.sort_values(by="Speedup", ascending=False)
# merged = merged.sort_values(by="Speedup", ascending=False)
k = len(merged.groupby("Name"))
plt.figure(figsize=(12, 0.50 * k))
plt.rcParams['xtick.bottom'] = plt.rcParams['xtick.labelbottom'] = True
plt.rcParams['xtick.top'] = plt.rcParams['xtick.labeltop'] = True
plt.rcParams["xtick.bottom"] = plt.rcParams["xtick.labelbottom"] = True
plt.rcParams["xtick.top"] = plt.rcParams["xtick.labeltop"] = True
sns.set_style("whitegrid")
sns.set_palette("Set1")
sns.barplot(data=merged,
sns.barplot(
data=merged,
x="Speedup",
y="Name",
color="tab:red",
capsize=0.15,
errcolor="k",
errwidth=1.25)
errwidth=1.25,
)
plt.axvline(1.0, linestyle="--", color="k")
plt.tight_layout()
@ -50,7 +58,10 @@ print("Writing tables/compare.png")
plt.savefig("tables/compare.png", dpi=150)
print("Writing tables/compare.csv")
merged.loc[:, ["Group",
merged.loc[
:,
[
"Group",
"Instance",
"Sample",
"A Time (s)",
@ -60,5 +71,5 @@ merged.loc[:, ["Group",
"A Value",
"B Value",
"Value diff (%)",
]
].to_csv("tables/compare.csv", index_label="Index")
],
].to_csv("tables/compare.csv", index_label="Index")

52
benchmark/scripts/table.py
Unescape View File

@ -9,8 +9,8 @@ from tabulate import tabulate
def process_all_log_files():
pathlist = list(Path(".").glob('results/*/*/*.log'))
pathlist += list(Path(".").glob('results/*/*.log'))
pathlist = list(Path(".").glob("results/*/*/*.log"))
pathlist += list(Path(".").glob("results/*/*.log"))
rows = []
for path in pathlist:
if ".ipy" in str(path):
@ -52,37 +52,55 @@ def process(filename):
with open(filename) as file:
for line in file.readlines():
m = re.search(r"Explored ([0-9.e+]*) nodes \(([0-9.e+]*) simplex iterations\) in ([0-9.e+]*) seconds", line)
m = re.search(
r"Explored ([0-9.e+]*) nodes \(([0-9.e+]*) simplex iterations\) in ([0-9.e+]*) seconds",
line,
)
if m is not None:
nodes += int(m.group(1))
simplex_iterations += int(m.group(2))
optimize_time += float(m.group(3))
m = re.search(r"Best objective ([0-9.e+]*), best bound ([0-9.e+]*), gap ([0-9.e+]*)\%", line)
m = re.search(
r"Best objective ([0-9.e+]*), best bound ([0-9.e+]*), gap ([0-9.e+]*)\%",
line,
)
if m is not None:
primal_bound = float(m.group(1))
dual_bound = float(m.group(2))
gap = round(float(m.group(3)), 3)
m = re.search(r"Root relaxation: objective ([0-9.e+]*), ([0-9.e+]*) iterations, ([0-9.e+]*) seconds", line)
m = re.search(
r"Root relaxation: objective ([0-9.e+]*), ([0-9.e+]*) iterations, ([0-9.e+]*) seconds",
line,
)
if m is not None:
root_obj = float(m.group(1))
root_iterations += int(m.group(2))
root_time += float(m.group(3))
m = re.search(r"Presolved: ([0-9.e+]*) rows, ([0-9.e+]*) columns, ([0-9.e+]*) nonzeros", line)
m = re.search(
r"Presolved: ([0-9.e+]*) rows, ([0-9.e+]*) columns, ([0-9.e+]*) nonzeros",
line,
)
if m is not None:
n_rows_presolved = int(m.group(1))
n_cols_presolved = int(m.group(2))
n_nz_presolved = int(m.group(3))
m = re.search(r"Optimize a model with ([0-9.e+]*) rows, ([0-9.e+]*) columns and ([0-9.e+]*) nonzeros", line)
m = re.search(
r"Optimize a model with ([0-9.e+]*) rows, ([0-9.e+]*) columns and ([0-9.e+]*) nonzeros",
line,
)
if m is not None:
n_rows_orig = int(m.group(1))
n_cols_orig = int(m.group(2))
n_nz_orig = int(m.group(3))
m = re.search(r"Variable types: ([0-9.e+]*) continuous, ([0-9.e+]*) integer \(([0-9.e+]*) binary\)", line)
m = re.search(
r"Variable types: ([0-9.e+]*) continuous, ([0-9.e+]*) integer \(([0-9.e+]*) binary\)",
line,
)
if m is not None:
n_cont_vars_presolved = int(m.group(1))
n_bin_vars_presolved = int(m.group(3))
@ -103,7 +121,10 @@ def process(filename):
if m is not None:
total_time = float(m.group(1))
m = re.search(r"User-callback calls ([0-9.e+]*), time in user-callback ([0-9.e+]*) sec", line)
m = re.search(
r"User-callback calls ([0-9.e+]*), time in user-callback ([0-9.e+]*) sec",
line,
)
if m is not None:
cb_calls = int(m.group(1))
cb_time = float(m.group(2))
@ -150,6 +171,7 @@ def process(filename):
"Transmission screening calls": transmission_calls,
}
def generate_chart():
import pandas as pd
import matplotlib.pyplot as plt
@ -159,7 +181,9 @@ def generate_chart():
files = ["tables/benchmark.csv"]
for f in files:
table = pd.read_csv(f, index_col=0)
table.loc[:, "Instance"] = table.loc[:,"Group"] + "/" + table.loc[:,"Instance"]
table.loc[:, "Instance"] = (
table.loc[:, "Group"] + "/" + table.loc[:, "Instance"]
)
table.loc[:, "Filename"] = f
tables += [table]
benchmark = pd.concat(tables, sort=True)
@ -168,16 +192,18 @@ def generate_chart():
plt.figure(figsize=(12, 0.50 * k))
sns.set_style("whitegrid")
sns.set_palette("Set1")
sns.barplot(y="Instance",
sns.barplot(
y="Instance",
x="Total time (s)",
color="tab:red",
capsize=0.15,
errcolor="k",
errwidth=1.25,
data=benchmark);
data=benchmark,
)
plt.tight_layout()
print("Writing tables/benchmark.png")
plt.savefig("tables/benchmark.png", dpi=150);
plt.savefig("tables/benchmark.png", dpi=150)
if __name__ == "__main__":

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